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Intron Name: Anas_platyrhynchos_platyrhynchos_26_693100_693642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

693100 - 693642

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTAGAC

U12 Branch Point Sequence:

TCTTGGTTAGAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

51.5

0.04

1.3

52.4

43.3

Major PPT

0.79

0.8

80.9

31.1

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

42.6

-0.5

2.5

59.09

45.9

Associated Gene:

Gene:

CCT3

Ensembl Gene ID:

ENSAPLG00000009108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030880

689247 - 694484

5238