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Intron Name: Anas_platyrhynchos_platyrhynchos_26_698522_698616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

698522 - 698616

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GTCAGTACAAAT

Flanking Amino Acid:

TCLGPRAMMKMLLDPMGGIV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

79.3

0.66

72.9

42.2

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

37.5

-0.8

51.94

42.2

Associated Gene:

Gene:

CCT3

Ensembl Gene ID:

ENSAPLG00000009108

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035985

690146 - 699949

9804

ENSAPLT00000009516

690146 - 699197

9052