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Intron Name: Anas_platyrhynchos_platyrhynchos_26_703977_704150_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

703977 - 704150

Intron Length:

174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGGAAA

U12 Branch Point Sequence:

GTGGCAAATACT

Flanking Amino Acid:

YLAQEGGQVVVGFTSAPGQG

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

68.4

36.9

Major BPS

46.6

-0.2

1.4

53.4

40.4

Major PPT

82.5

0.73

0.8

80.1

31.9

Minor 5ss

27.7

-2.6

31.6

37.6

Minor BPS

-0.9

2.3

54.85

46.3

Associated Gene:

Gene:

SSR2

Ensembl Gene ID:

ENSAPLG00000012456

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012983

702707 - 704647

1941