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Intron Name: Anas_platyrhynchos_platyrhynchos_26_707082_707633_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

707082 - 707633

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCCCAAAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATG

Flanking Amino Acid:

NDKDYWLVKNSWGVRFGDDG

Intron Amino Acid Position:

298

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

30.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

63.5

0.3

64.8

29.7

Minor 5ss

32.3

-2

3.2

41.6

Minor BPS

62.3

0.25

1.7

71.16

36.4

Associated Gene:

Gene:

CTSS

Ensembl Gene ID:

ENSAPLG00000012624

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013159

706982 - 710691

3710