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Intron Name: Anas_platyrhynchos_platyrhynchos_26_715309_715406_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

715309 - 715406

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGGGTC

5'SS Class:

major

3'SS Sequence:

TGGTTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CCCTTCTCACCT

Flanking Amino Acid:

SEDAYPYIGQDESCMYSPTG

Intron Amino Acid Position:

189

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.3

74.9

35.2

Major BPS

0.87

0.8

85.6

Major PPT

74.5

0.55

69.4

41.7

Minor 5ss

29.2

-2.4

3.5

41.1

45.5

Minor BPS

48.3

-0

1.9

62.74

47.7

Associated Gene:

Gene:

CTSK

Ensembl Gene ID:

ENSAPLG00000012768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013312

714743 - 717575

2833