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Intron Name: Anas_platyrhynchos_platyrhynchos_26_715860_715974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

715860 - 715974

Intron Length:

115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GCTCCTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTCAC

U12 Branch Point Sequence:

TATGGCTTCACC

Flanking Amino Acid:

QLAMNHLGDMTSEEVVRTMT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

73.6

30.3

Major BPS

59.7

0.24

1.3

65.3

41.6

Major PPT

74.4

0.55

0.8

32.2

Minor 5ss

27.7

-2.6

31.2

36.9

Minor BPS

49.5

-0

2.3

67.06

44.6

Associated Gene:

Gene:

CTSK

Ensembl Gene ID:

ENSAPLG00000012768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013312

714743 - 717575

2833