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Intron Name: Anas_platyrhynchos_platyrhynchos_26_716089_716323_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

716089 - 716323

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGTAT

5'SS Class:

major

3'SS Sequence:

ACAGGCGGATGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

ACTGTCTCACCC

Flanking Amino Acid:

WKKTYRKQYNGGTEADLGEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

0.9

73.5

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

39.2

-0.6

1.6

32.4

40.6

Minor 5ss

33.1

-1.9

3.4

43.1

45.5

Minor BPS

46.5

-0.2

1.9

55.94

42.9

Associated Gene:

Gene:

CTSK

Ensembl Gene ID:

ENSAPLG00000012768

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013312

714743 - 717575

2833