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Intron Name: Anas_platyrhynchos_platyrhynchos_26_728757_729223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

728757 - 729223

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTAAAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATTCCTTTAAAA

Flanking Amino Acid:

CVATVGYQPQELLGKDIVDF

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

73.1

0.58

79.6

29.1

Major PPT

61.7

0.26

61.1

38.2

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

70.6

0.64

1.3

76.83

33.2

Associated Gene:

Gene:

ARNT

Ensembl Gene ID:

ENSAPLG00000013397

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029890

721487 - 742045

20559

ENSAPLT00000024035

721487 - 741925

20439

ENSAPLT00000014009

721487 - 741925

20439

ENSAPLT00000042292

721487 - 742045

20559