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Intron Name: Anas_platyrhynchos_platyrhynchos_26_751368_751808_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
751368 - 751808

Intron Length:
441

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTAACCGGG

5'SS Class:
major

3'SS Sequence:
TCTGTGGTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAC

U12 Branch Point Sequence:
CGTTTCTCACCT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.7
0.32
1.3
49.3
47.4

Major BPS
85
0.87
0.8
85.6
23

Major PPT
76.4
0.59
1
72.6
42.4

Minor 5ss
41.8
-0.9
3.3
55.8
48.4

Minor BPS
53.2
0.18
1.9
72.31
44.6

Associated Gene:

Gene:
SETDB1

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

750878 - 768802
17925

750878 - 768802
17925