Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_756344_757218_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

756344 - 757218

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGGCAA

5'SS Class:

major

3'SS Sequence:

CTCCTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAG

U12 Branch Point Sequence:

TGTGTTGTGAGT

Flanking Amino Acid:

DGSLVKILFLDDKRCEWIYR

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

60.2

Major BPS

57.3

0.18

1.7

57.1

49.4

Major PPT

87.7

0.85

0.7

83.2

25.1

Minor 5ss

36.3

-1.6

3.3

43.3

46.3

Minor BPS

42.4

-0.5

2.2

62.13

42.8

Associated Gene:

Gene:

SETDB1

Ensembl Gene ID:

ENSAPLG00000013908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030008

750878 - 768802

17925

ENSAPLT00000027511

750878 - 768802

17925

ENSAPLT00000014499

750878 - 768802

17925