Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_761638_761754_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

761638 - 761754

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGATCGC

5'SS Class:

major

3'SS Sequence:

CCCACCACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

AGATTGATAACA

Flanking Amino Acid:

EMFCLDPYVLVAYSKERIPG

Intron Amino Acid Position:

658

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.37

1.1

53.1

44.2

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

61.7

0.26

0.9

53.4

29.4

Minor 5ss

32.7

-2

3.2

40.5

Minor BPS

46.4

-0.2

2.2

60.2

39.2

Associated Gene:

Gene:

SETDB1

Ensembl Gene ID:

ENSAPLG00000013908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030008

750878 - 768802

17925