Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_762464_762806_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

762464 - 762806

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAC

U12 Branch Point Sequence:

AGATGTTTCACT

Flanking Amino Acid:

HKRLEECLPTGVYECNKRCK

Intron Amino Acid Position:

769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.1

38.4

Major BPS

72.3

0.55

1.2

77.4

37.4

Major PPT

89.4

0.89

0.6

87.9

22.1

Minor 5ss

29.2

-2.4

2.5

36.7

Minor BPS

48.2

-0

2.1

67.65

43.2

Associated Gene:

Gene:

SETDB1

Ensembl Gene ID:

ENSAPLG00000013908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030008

750878 - 768802

17925

ENSAPLT00000027511

750878 - 768802

17925

ENSAPLT00000014499

750878 - 768802

17925