Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_764499_765163_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

764499 - 765163

Intron Length:

665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGGAAG

5'SS Class:

major

3'SS Sequence:

GTCTTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

GAAATCTTAATC

Flanking Amino Acid:

DGESKALKKDEHEDSSKFPG

Intron Amino Acid Position:

1032

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

71.6

39.7

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.3

0.68

0.9

76.2

37.8

Minor 5ss

-1.8

3.2

44.2

43.7

Minor BPS

61.5

0.34

1.3

61.93

36.9

Associated Gene:

Gene:

SETDB1

Ensembl Gene ID:

ENSAPLG00000013908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027511

750878 - 768802

17925

ENSAPLT00000014499

750878 - 768802

17925

ENSAPLT00000030008

750878 - 768802

17925