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Intron Name: Anas_platyrhynchos_platyrhynchos_26_772582_772690_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
772582 - 772690

Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTGAGCGTT

5'SS Class:
major

3'SS Sequence:
ATTCTTTTGTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGCTAAT

U12 Branch Point Sequence:
CCTGCCATAACA

Flanking Amino Acid:
IVTRLVILPFWIMHCTVVYP

Intron Amino Acid Position:
283

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.5
0.7
0.9
74
36.6

Major BPS
70.5
0.51
1.1
69.7
35.5

Major PPT
80.5
0.69
0.9
81
36

Minor 5ss
37
-1.5
3.6
52.2
46

Minor BPS
58.8
0.27
1.8
67.8
44.7

Associated Gene:

Gene:
CERS2

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

771964 - 776514
4551