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Intron Name: Anas_platyrhynchos_platyrhynchos_26_773720_773924_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
773720 - 773924

Intron Length:
205

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGACCA

5'SS Class:
strong_major

3'SS Sequence:
TTCCTTTTTCCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATCTGAG

U12 Branch Point Sequence:
CGGTGCCCATCT

Flanking Amino Acid:
PSLLKKFREASWRFTFYLIA

Intron Amino Acid Position:
137

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.1
0.83
0.9
70.4
35.4

Major BPS
58.6
0.21
1.5
57.1
41.8

Major PPT
90.5
0.91
0.6
83.8
31.2

Minor 5ss
26.8
-2.7
2.8
31.2
42.4

Minor BPS
38
-0.8
2.3
53.44
47.3

Associated Gene:

Gene:
CERS2

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

772505 - 775194
2690

771964 - 776514
4551