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Intron Name: Anas_platyrhynchos_platyrhynchos_26_853867_854186_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
853867 - 854186

Intron Length:
320

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAC|GTAAGTACC

5'SS Class:
major

3'SS Sequence:
CTTTGTCTTTAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTAAA

U12 Branch Point Sequence:
TGTTACTAAAGT

Flanking Amino Acid:
MCNTAFKKIPLKPSPSKKSR

Intron Amino Acid Position:
499

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1.3
78.8
35.5

Major BPS
77.5
0.68
0.8
76.2
24.6

Major PPT
75.7
0.58
1
79.3
33.1

Minor 5ss
38.4
-1.3
2.7
46.6
34.4

Minor BPS
53.6
0.19
2.1
77.67
44.4

Associated Gene:

Gene:
PIP5K1A

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

678435 - 858957
180523

678435 - 858957
180523