About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_892758_893096_R

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
892758 - 893096
Intron Length:
339

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAT|GTGAGTGAG
5'SS Class:
major
3'SS Sequence:
CTCTGCCTTCCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTCCAT
U12 Branch Point Sequence:
CTGCCCTCCACC
Flanking Amino Acid:
AFKLTTEFVDVMGGPDGDMF
Intron Amino Acid Position:
752

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.6
0.67
1
70.4
35.5
Major BPS
64.7
0.37
1.3
74.7
40
Major PPT
78.6
0.64
0.8
69
37.1
Minor 5ss
29
-2.4
3.2
35.6
41.4
Minor BPS
48.3
-0.1
2
59.89
45.1

Associated Gene:

Gene:
PI4KB
Ensembl Gene ID:
ENSAPLG00000002437
Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000026646
890133 - 908533
18401
ENSAPLT00000002475
890133 - 908533
18401
ENSAPLT00000036083
890133 - 908533
18401