Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_896110_899326_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

896110 - 899326

Intron Length:

3217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCC|GTAAGTGGC

5'SS Class:

major

3'SS Sequence:

TACAACTTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAC

U12 Branch Point Sequence:

TCCCCTACAACT

Flanking Amino Acid:

TESLDKSFCSPVRLAPEREF

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.4

61.8

43.5

Major BPS

77.9

0.69

78.3

31.3

Major PPT

74.1

0.54

0.9

69.6

40.8

Minor 5ss

34.9

-1.7

3.2

48.1

41.3

Minor BPS

48.2

-0

1.8

66.41

44.2

Associated Gene:

Gene:

PI4KB

Ensembl Gene ID:

ENSAPLG00000002437

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026646

890133 - 908533

18401

ENSAPLT00000002475

890133 - 908533

18401