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Intron Name: Anas_platyrhynchos_platyrhynchos_26_899372_904925_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
899372 - 904925

Intron Length:
5554

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATGGTG

5'SS Class:
major

3'SS Sequence:
ATCCATTTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTCCAT

U12 Branch Point Sequence:
CTTCCATCCATT

Flanking Amino Acid:
SNPKVESEEEELSSSTESLD

Intron Amino Acid Position:
339

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.4
0.69
1
69.7
40.9

Major BPS
65
0.37
1.3
76.1
38

Major PPT
73.9
0.54
0.9
65.1
40.3

Minor 5ss
32.9
-2
3.6
46.5
48.8

Minor BPS
44.8
-0.3
2.2
66.82
44

Associated Gene:

Gene:
PI4KB

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

890133 - 908533
18401

890133 - 908533
18401