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Intron Name: Anas_platyrhynchos_platyrhynchos_26_916254_916387_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

916254 - 916387

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTGCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCACAT

U12 Branch Point Sequence:

GCTGCCACATCC

Flanking Amino Acid:

SESSDRSQGQSKKESSPKAS

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

48.9

-0

1.2

56.9

40.5

Major PPT

82.3

0.73

0.8

76.5

32.1

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

42.3

-0.6

2.1

52.27

44.7

Associated Gene:

Gene:

RFX5

Ensembl Gene ID:

ENSAPLG00000027459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046140

915360 - 919308

3949

ENSAPLT00000035677

915360 - 920177

4818