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Intron Name: Anas_platyrhynchos_platyrhynchos_26_916850_917151_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

916850 - 917151

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

GTCCTGCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

GGAGGCTCACGG

Flanking Amino Acid:

PSLDLKVTETQSELTDLVQS

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

68.7

Major BPS

52.1

0.05

1.3

41.8

Major PPT

63.1

0.29

57.8

38.5

Minor 5ss

39.8

-1.1

3.1

61.7

42.2

Minor BPS

32.4

-1.4

2.1

29.56

41.1

Associated Gene:

Gene:

RFX5

Ensembl Gene ID:

ENSAPLG00000027459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046140

915360 - 919308

3949

ENSAPLT00000035677

915360 - 920177

4818