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Intron Name: Anas_platyrhynchos_platyrhynchos_26_917234_917656_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

917234 - 917656

Intron Length:

423

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

AAA|ATATCCTTC

5'SS Class:

strong_minor

3'SS Sequence:

AACCTTGCCAAAC|G

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

CAGCCCTTAACC

Flanking Amino Acid:

ARRLGGRGQSKYCYSGIRRK

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

-0.9

3.4

50.4

41.8

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

33.5

-0.9

3.1

44.1

35.8

Minor 5ss

93.6

1.45

0.8

93.1

18.2

Minor BPS

70.4

0.62

1.3

69.17

Associated Gene:

Gene:

RFX5

Ensembl Gene ID:

ENSAPLG00000027459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035677

915360 - 920177

4818

ENSAPLT00000046140

915360 - 919308

3949