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Intron Name: Anas_platyrhynchos_platyrhynchos_26_917774_917977_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

917774 - 917977

Intron Length:

204

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

GCCTGTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGCAG

U12 Branch Point Sequence:

TTCCCCTGCAGC

Flanking Amino Acid:

LPKQDVYDAYKQYCDNLCCR

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

59.5

39.8

Major BPS

40.6

-0.5

1.6

48.7

45.1

Major PPT

0.34

0.8

61.8

34.9

Minor 5ss

32.9

-1.9

3.3

39.2

40.5

Minor BPS

-0.3

2.2

60.44

44.6

Associated Gene:

Gene:

RFX5

Ensembl Gene ID:

ENSAPLG00000027459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046140

915360 - 919308

3949

ENSAPLT00000035677

915360 - 920177

4818