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Intron Name: Anas_platyrhynchos_platyrhynchos_26_918104_918739_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

918104 - 918739

Intron Length:

636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCGGGGAGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TCCCCGGGGAGC

Flanking Amino Acid:

NPCRTKWTPSCSSLDLSSLS

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

49.2

-0

1.1

41.6

37.1

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

31.4

-1.4

2.5

39.1

40.4

Associated Gene:

Gene:

RFX5

Ensembl Gene ID:

ENSAPLG00000027459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035677

915360 - 920177

4818