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Intron Name: Anas_platyrhynchos_platyrhynchos_26_918774_919177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

918774 - 919177

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

CTGTCCCGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTAACAT

U12 Branch Point Sequence:

CCTGCCCTAACA

Flanking Amino Acid:

RCCRSCGAPSPNPCRTKWTP

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.3

61.1

39.4

Major BPS

58.7

0.22

1.2

Major PPT

71.5

0.48

65.6

Minor 5ss

-2.1

3.5

42.8

38.8

Minor BPS

57.9

0.24

1.9

67.55

44.9

Associated Gene:

Gene:

RFX5

Ensembl Gene ID:

ENSAPLG00000027459

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046140

915360 - 919308

3949

ENSAPLT00000035677

915360 - 920177

4818