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Intron Name: Anas_platyrhynchos_platyrhynchos_26_923904_924254_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
923904 - 924254

Intron Length:
351

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCGAGC

5'SS Class:
major

3'SS Sequence:
TGGCCCTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CAGGAAT

U12 Branch Point Sequence:
TGAGCAGGAATG

Flanking Amino Acid:
VNPKSPNYCQVIHRLPMPNL

Intron Amino Acid Position:
80

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.2
0.38
1.3
58.9
46

Major BPS
45.8
-0.2
1.4
51
41.5

Major PPT
75.9
0.58
0.9
69.2
36.9

Minor 5ss
37.1
-1.5
3.3
52.2
44.6

Minor BPS
38.3
-1
2.2
43.07
42.1

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

921059 - 927903
6845