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Intron Name: Anas_platyrhynchos_platyrhynchos_26_93308_93461_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

93308 - 93461

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGCTGG

5'SS Class:

major

3'SS Sequence:

CCTGCGCGGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCTC

U12 Branch Point Sequence:

GTTTTCTCCCCG

Flanking Amino Acid:

QSGKGLMHHLTEDHLALQNT

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

58.4

43.1

Major BPS

35.6

-0.9

4.2

77.4

37.4

Major PPT

54.8

0.11

1.1

49.4

39.3

Minor 5ss

37.9

-1.4

43.6

Minor BPS

36.7

-1.1

3.6

55.64

45.7

Associated Gene:

Gene:

MEF2D

Ensembl Gene ID:

ENSAPLG00000007271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029901

87158 - 140670

53513

ENSAPLT00000017385

87158 - 140670

53513

ENSAPLT00000007584

87158 - 110381

23224