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Intron Name: Anas_platyrhynchos_platyrhynchos_26_93659_96170_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

93659 - 96170

Intron Length:

2512

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

CCCTTCTCACCT

Flanking Amino Acid:

TTNGACPSPVGNGYVSARAS

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

0.87

0.8

85.6

Major PPT

86.1

0.81

0.6

81.7

23.1

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

48.3

-0

1.9

62.74

47.7

Associated Gene:

Gene:

MEF2D

Ensembl Gene ID:

ENSAPLG00000007271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027360

87158 - 123637

36480

ENSAPLT00000017385

87158 - 140670

53513

ENSAPLT00000007584

87158 - 110381

23224

ENSAPLT00000029901

87158 - 140670

53513