Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_946035_947580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

946035 - 947580

Intron Length:

1546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATTTT

5'SS Class:

strong_major

3'SS Sequence:

ATACTCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

GTATACTCATTT

Flanking Amino Acid:

TDPKAPRIHKVVEPVELFWK

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

82.9

29.9

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

70.9

0.47

0.9

67.8

Minor 5ss

55.6

0.19

2.5

75.5

40.6

Minor BPS

47.7

-0

1.9

67.33

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010148

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026477

941656 - 949273

7618

ENSAPLT00000010591

941656 - 949887

8232