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Intron Name: Anas_platyrhynchos_platyrhynchos_26_949117_949880_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
949117 - 949880

Intron Length:
764

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
AAG|GCAAGTAGT

5'SS Class:
strong_major

3'SS Sequence:
TCTACCTTGAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTAAA

U12 Branch Point Sequence:
TCTACCTTGAAA

Flanking Amino Acid:
MKGPREEILYLP

Intron Amino Acid Position:
3

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
99.3
1.16
0.7
92
25.2

Major BPS
70.2
0.5
1
71.6
30.1

Major PPT
61.3
0.25
1.2
62.9
37.4

Minor 5ss
27.1
-2.6
3.8
42.5
44.3

Minor BPS
65.9
0.49
1.5
72.5
39.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
26

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

941656 - 949887
8232