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Intron Name: Anas_platyrhynchos_platyrhynchos_26_96228_98310_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

96228 - 98310

Intron Length:

2083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

AATGGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TGCCTCTGACCC

Flanking Amino Acid:

PGLPQRPASAGAMLGGDLNT

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

66.6

39.6

Major BPS

71.8

0.54

1.2

32.5

Major PPT

70.9

0.47

62.5

43.4

Minor 5ss

31.2

-2.1

3.3

41.1

45.6

Minor BPS

47.6

-0.2

1.7

41.4

Associated Gene:

Gene:

MEF2D

Ensembl Gene ID:

ENSAPLG00000007271

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027360

87158 - 123637

36480

ENSAPLT00000017385

87158 - 140670

53513

ENSAPLT00000007584

87158 - 110381

23224

ENSAPLT00000029901

87158 - 140670

53513