Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_990796_991122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

990796 - 991122

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGGAA

5'SS Class:

major

3'SS Sequence:

TGTTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GCTCTTTTATTT

Flanking Amino Acid:

YLALFKNYTACGVKLSCSSC

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

63.8

35.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

85.2

0.79

0.9

76.9

42.1

Minor 5ss

28.7

-2.4

3.5

34.4

43.8

Minor BPS

50.8

0.1

1.5

65.03

40.3

Associated Gene:

Gene:

POGZ

Ensembl Gene ID:

ENSAPLG00000009926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010358

971242 - 993734

22493