Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_26_992042_992158_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

992042 - 992158

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACAGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCCTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

TTGGTTTTAAGA

Flanking Amino Acid:

FRGPSWISHSRHVQPQDKSM

Intron Amino Acid Position:

773

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

75.1

41.1

Major BPS

75.6

0.64

1.5

34.5

Major PPT

70.2

0.46

67.6

32.8

Minor 5ss

40.5

-1.1

3.1

57.9

46.4

Minor BPS

55.6

0.17

1.7

65.7

41.8

Associated Gene:

Gene:

POGZ

Ensembl Gene ID:

ENSAPLG00000009926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010358

971242 - 993734

22493