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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1029359_1029535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1029359 - 1029535

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCCAG

5'SS Class:

major

3'SS Sequence:

TGTTTCCCGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

CCCCTGCTAACT

Flanking Amino Acid:

AQWIAQQGGWVAALDLDNVY

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

55.8

44.9

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

75.1

0.57

74.4

36.5

Minor 5ss

31.3

-2.1

30.2

42.9

Minor BPS

42.4

-0.5

2.3

56.84

45.9

Associated Gene:

Gene:

BAK1

Ensembl Gene ID:

ENSAPLG00000003058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003092

1027907 - 1042730

14824

ENSAPLT00000029860

1028571 - 1042730

14160