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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1031932_1032061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1031932 - 1032061

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACTC

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCTGGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTGTTGTAATG

Flanking Amino Acid:

EIAEIQQDLGSTGSLVGRRL

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

72.3

37.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

67.4

0.39

64.8

36.4

Minor 5ss

35.9

-1.6

3.3

50.8

45.8

Minor BPS

46.4

-0.4

2.1

53.3

43.2

Associated Gene:

Gene:

BAK1

Ensembl Gene ID:

ENSAPLG00000003058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029860

1028571 - 1042730

14160

ENSAPLT00000003092

1027907 - 1042730

14824