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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1032198_1038641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1032198 - 1038641

Intron Length:

6444

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTGAC

U12 Branch Point Sequence:

GCCCCCTTGACT

Flanking Amino Acid:

GRRLSQELNSEDQVAQETEE

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

61.6

0.29

1.1

54.6

40.8

Major PPT

82.6

0.73

0.8

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

67.7

0.64

1.3

73.58

43.3

Associated Gene:

Gene:

BAK1

Ensembl Gene ID:

ENSAPLG00000003058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029860

1028571 - 1042730

14160

ENSAPLT00000003092

1027907 - 1042730

14824