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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1038760_1042508_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1038760 - 1042508

Intron Length:

3749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCTCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAC

U12 Branch Point Sequence:

CCTGGCTCACGT

Flanking Amino Acid:

PGPPGPRREPVKLILPSISA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

72.6

38.9

Major BPS

52.1

0.05

1.3

41.8

Major PPT

75.1

0.57

0.8

65.5

36.1

Minor 5ss

31.1

-2.2

2.7

37.6

Minor BPS

37.1

-0.9

2.3

50.75

49.4

Associated Gene:

Gene:

BAK1

Ensembl Gene ID:

ENSAPLG00000003058

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029860

1028571 - 1042730

14160

ENSAPLT00000003092

1027907 - 1042730

14824