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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1076614_1076715_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1076614 - 1076715

Intron Length:
102

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGCTGGGG

5'SS Class:
major

3'SS Sequence:
TCTTGCTGCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGTGAC

U12 Branch Point Sequence:
CCTTCTGGGATT

Flanking Amino Acid:
ELADNAGCKEVNSVNCNTSW

Intron Amino Acid Position:
159

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
62.7
0.3
1.1
47.8
42.6

Major BPS
71.3
0.53
1.2
63.1
44.5

Major PPT
68.5
0.42
0.9
61.6
40

Minor 5ss
22.2
-3.2
3.4
29.3
43.3

Minor BPS
45
-0.3
2.1
62.49
42.8

Associated Gene:

Gene:
ITPR3

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1075820 - 1102200
26381

1075820 - 1102200
26381