Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_1076800_1077625_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1076800 - 1077625

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

GTCCCGGTGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GTGTCCTCACTG

Flanking Amino Acid:

RDHMEEVLKGGDVVRLFHAE

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.6

42.7

Major BPS

72.4

0.56

73.5

32.5

Major PPT

57.9

0.18

1.1

49.2

43.9

Minor 5ss

31.2

-2.2

3.1

31.4

42.6

Minor BPS

49.2

-0.2

1.9

56.18

45.4

Associated Gene:

Gene:

ITPR3

Ensembl Gene ID:

ENSAPLG00000003078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026264

1075820 - 1102200

26381

ENSAPLT00000003339

1075820 - 1102200

26381