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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1084578_1084812_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1084578 - 1084812

Intron Length:
235

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAACTCTT

5'SS Class:
major

3'SS Sequence:
CCTCTCCCTGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTCAT

U12 Branch Point Sequence:
ACCCCATTCATC

Flanking Amino Acid:
DGTAPAFDSTTAAMNLDRIG

Intron Amino Acid Position:
970

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1.2
75.5
40.6

Major BPS
79.8
0.74
0.9
81.3
29.9

Major PPT
79.5
0.66
0.7
73.1
25.1

Minor 5ss
47.4
-0.3
2.9
68.1
36.5

Minor BPS
44.8
-0.4
1.9
50.93
40.2

Associated Gene:

Gene:
ITPR3

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1075820 - 1102200
26381

1075820 - 1102200
26381