Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_1092646_1092898_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1092646 - 1092898

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAGG

5'SS Class:

major

3'SS Sequence:

TTCTCCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

CTCCTCTCAGCA

Flanking Amino Acid:

YRMDLVLQLKDNASKLLLAL

Intron Amino Acid Position:

1940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

63.6

48.1

Major BPS

58.6

0.22

1.5

38.9

Major PPT

75.7

0.58

0.9

69.5

36.8

Minor 5ss

37.4

-1.4

3.1

48.3

47.5

Minor BPS

-0.2

1.8

56.43

42.9

Associated Gene:

Gene:

ITPR3

Ensembl Gene ID:

ENSAPLG00000003078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026264

1075820 - 1102200

26381

ENSAPLT00000003339

1075820 - 1102200

26381