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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1094517_1094982_F


Intron Information:

Intron Rank:
44

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1094517 - 1094982

Intron Length:
466

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
GAG|GCAAGACCT

5'SS Class:
strong_major

3'SS Sequence:
CTGCTTCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTGAC

U12 Branch Point Sequence:
TCTGACGGCACC

Flanking Amino Acid:
YYEKHTSQIEIVRLDRSMEQ

Intron Amino Acid Position:
2072

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.7
1.01
0.9
79.8
34.7

Major BPS
72.6
0.56
0.9
63.1
35.8

Major PPT
79.1
0.65
0.8
73.3
31.7

Minor 5ss
24.3
-3
3.9
40
45.5

Minor BPS
37.4
-1
2.5
51.54
45.4

Associated Gene:

Gene:
ITPR3

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1075820 - 1102200
26381

1075820 - 1102200
26381