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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1095176_1096160_F


Intron Information:

Intron Rank:
45

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1095176 - 1096160

Intron Length:
985

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTAAGAGCA

5'SS Class:
major

3'SS Sequence:
CCTCTCCCTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGAGAT

U12 Branch Point Sequence:
GTTGGCTGAGAT

Flanking Amino Acid:
NEMEWQKKLRSMPLMYWFSR

Intron Amino Acid Position:
2136

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.1
62.8
35.8

Major BPS
51.7
0.04
1.3
50.1
44.2

Major PPT
78.7
0.64
0.7
69.4
31.3

Minor 5ss
32.9
-1.9
3.4
45.4
43.3

Minor BPS
42.8
-0.4
2.2
63.05
46.4

Associated Gene:

Gene:
ITPR3

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1075820 - 1102200
26381

1075820 - 1102200
26381