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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1097264_1097742_F


Intron Information:

Intron Rank:
48

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1097264 - 1097742

Intron Length:
479

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTACAGTAA

5'SS Class:
major

3'SS Sequence:
CTGGTCCTTTCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATGGCAT

U12 Branch Point Sequence:
AGCACCCTATGG

Flanking Amino Acid:
FVHELFYSILLFDLIYREET

Intron Amino Acid Position:
2291

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.8
0.33
1.1
58.1
37.2

Major BPS
51.1
0.03
1.5
63.1
44.4

Major PPT
77.3
0.61
0.9
73.4
37.1

Minor 5ss
34.5
-1.8
3.5
43
46.5

Minor BPS
39.1
-0.9
2.1
39.98
43.4

Associated Gene:

Gene:
ITPR3

Ensembl Gene ID:

Chromosome:
27

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1075820 - 1102200
26381

1075820 - 1102200
26381