Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_1099460_1100188_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1099460 - 1100188

Intron Length:

729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTACCTTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTGAC

U12 Branch Point Sequence:

CTGTGCTTGACT

Flanking Amino Acid:

EILKTTCFICGLERDKFDNK

Intron Amino Acid Position:

2484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

56.2

0.15

1.3

44.3

Major PPT

76.4

0.59

0.8

68.5

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

64.1

0.52

1.9

78.7

44.1

Associated Gene:

Gene:

ITPR3

Ensembl Gene ID:

ENSAPLG00000003078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026264

1075820 - 1102200

26381

ENSAPLT00000003339

1075820 - 1102200

26381