Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_27_1100350_1100800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1100350 - 1100800

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTGTC

5'SS Class:

strong_major

3'SS Sequence:

GGTCTCTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAG

U12 Branch Point Sequence:

TTCCTGTTAAGT

Flanking Amino Acid:

PESYVAQMIKNKNLDWFPRM

Intron Amino Acid Position:

2538

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.8

Major BPS

60.4

0.26

1.6

69.7

44.2

Major PPT

74.3

0.55

0.9

65.2

41.1

Minor 5ss

36.2

-1.6

3.5

52.1

45.1

Minor BPS

48.8

-0

2.3

72.32

44.9

Associated Gene:

Gene:

ITPR3

Ensembl Gene ID:

ENSAPLG00000003078

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026264

1075820 - 1102200

26381

ENSAPLT00000003339

1075820 - 1102200

26381