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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1165228_1166964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1165228 - 1166964

Intron Length:

1737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACACAC

U12 Branch Point Sequence:

CACCACACACCC

Flanking Amino Acid:

AVEGFFATLGGQVALWSLVV

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.6

32.5

Major BPS

49.1

-0

0.9

56.3

29.4

Major PPT

74.4

0.55

0.7

68.7

Minor 5ss

31.9

-2.1

3.6

47.6

Minor BPS

35.7

-1.1

1.9

39.33

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005325

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005513

1164867 - 1169107

4241