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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1280162_1280506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1280162 - 1280506

Intron Length:

345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCACAC

U12 Branch Point Sequence:

CCCCCCTCCATC

Flanking Amino Acid:

TILPKRVSVKGFDRYFSSRT

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.3

1.04

0.8

79.7

35.4

Major BPS

55.5

0.14

64.3

32.4

Major PPT

63.6

0.31

60.5

35.2

Minor 5ss

-1.9

3.2

43.9

Minor BPS

43.9

-0.5

1.9

47.19

42.9

Associated Gene:

Gene:

GRM4

Ensembl Gene ID:

ENSAPLG00000005514

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005733

1265561 - 1303820

38260