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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1350953_1351332_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1350953 - 1351332

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGAGG

5'SS Class:

major

3'SS Sequence:

ACTCTTTCCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAC

U12 Branch Point Sequence:

CCCCCAATAACT

Flanking Amino Acid:

PNLHVMKAMQSLKSRGYVKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

64.5

46.9

Major BPS

57.8

0.19

1.1

59.6

32.6

Major PPT

73.1

0.52

0.8

65.9

35.3

Minor 5ss

30.6

-2.2

3.3

39.8

45.8

Minor BPS

47.6

-0.1

1.9

63.42

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024980

1347204 - 1351780

4577

ENSAPLT00000009076

1347002 - 1351482

4481