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Intron Name: Anas_platyrhynchos_platyrhynchos_27_1364874_1365306_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1364874 - 1365306

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCCCC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCGTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TCATCCCCATCC

Flanking Amino Acid:

AEETTDSFWEVGNYKRTVKR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

65.8

40.2

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

61.5

0.26

1.1

53.4

41.5

Minor 5ss

33.7

-1.9

42.6

44.4

Minor BPS

46.4

-0.2

2.1

60.46

44.3

Associated Gene:

Gene:

PACSIN1

Ensembl Gene ID:

ENSAPLG00000008350

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039799

1364240 - 1367800

3561

ENSAPLT00000008678

1364240 - 1367995

3756